Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf488 domain-containing protein | FCU54_01560 | Not Available | Positive | 335065 - 335412 | 13355.9 |
| duf333 domain-containing lipoprotein yoaf | FCU54_01565 | Not Available | Negative | 335434 - 335688 | 8942.87 |
| diguanylate cyclase dgcp | FCU54_01570 | Not Available | Positive | 335871 - 336896 | 38535.8 |
| yoak family small membrane protein | FCU54_01575 | Not Available | Positive | 336929 - 337027 | 3458.45 |
| protein yoaj | FCU54_01580 | Not Available | Positive | 337030 - 337104 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | FCU54_01585 | Not Available | Negative | 337163 - 337411 | 8671.14 |
| duf1869 domain-containing protein | FCU54_01590 | Not Available | Negative | 337559 - 337741 | 6608.63 |
| duf1971 domain-containing protein | FCU54_01595 | Not Available | Negative | 337745 - 338104 | 13612.2 |
| leucine efflux protein leue | FCU54_01600 | Not Available | Negative | 338277 - 338915 | 23259.0 |
| lysr family transcriptional regulator | FCU54_01605 | Not Available | Negative | 339042 - 339965 | 34655.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





