Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU54_26490 | Not Available | Positive | 5324621 - 5324869 | 8208.46 |
| prepilin | FCU54_26495 | Not Available | Negative | 5324866 - 5325063 | 7136.53 |
| hypothetical protein | FCU54_26505 | Not Available | Negative | 5325471 - 5325663 | 7063.4 |
| hypothetical protein | FCU54_26510 | Not Available | Positive | 5325664 - 5326026 | 14163.2 |
| hth domain-containing protein | FCU54_26515 | Not Available | Negative | 5326231 - 5326552 | 12337.9 |
| shufflon protein b | FCU54_26520 | Not Available | Positive | 5326829 - 5327047 | 7524.71 |
| type ii toxin-antitoxin system rele/pare family toxin | FCU54_26525 | Not Available | Negative | 5327309 - 5327380 | 2838.47 |
| integrase | FCU54_26530 | Not Available | Negative | 5327504 - 5327823 | 12140.3 |
| hypothetical protein | FCU54_26535 | Not Available | Negative | 5327919 - 5328338 | 15337.2 |
| is91 family transposase | FCU54_26540 | Not Available | Negative | 5328339 - 5328724 | 14764.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





