Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | FCU54_25825 | Not Available | Positive | 5227856 - 5228086 | 8748.36 |
| type ii toxin-antitoxin system vapc family toxin | FCU54_25830 | Not Available | Positive | 5228083 - 5228499 | 15265.6 |
| atp-dependent endonuclease | FCU54_25835 | Not Available | Positive | 5228574 - 5230139 | 59483.6 |
| dna helicase uvrd | FCU54_25840 | Not Available | Positive | 5230124 - 5231146 | 39615.6 |
| hypothetical protein | FCU54_25845 | Not Available | Negative | 5231400 - 5231459 | 2293.74 |
| dsba family protein | FCU54_25855 | Not Available | Positive | 5232136 - 5232996 | 31177.8 |
| hypothetical protein | FCU54_25860 | Not Available | Positive | 5233030 - 5233458 | 15480.8 |
| hypothetical protein | FCU54_25865 | Not Available | Positive | 5233515 - 5233874 | 13292.7 |
| fe3+-siderophore abc transporter permease | FCU54_25870 | Not Available | Positive | 5233874 - 5234320 | 16331.4 |
| nitrite reductase | FCU54_25875 | Not Available | Positive | 5234317 - 5234835 | 18906.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





