Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease cho | FCU54_01310 | Not Available | Positive | 282883 - 283770 | 33755.0 |
| environmental stress-induced protein ves | FCU54_01315 | Not Available | Negative | 283730 - 284305 | 21634.1 |
| atp-independent periplasmic protein-refolding chaperone | FCU54_01320 | Not Available | Negative | 284508 - 284993 | 18172.1 |
| succinylglutamate desuccinylase | FCU54_01325 | Not Available | Negative | 285323 - 286291 | 35829.3 |
| n-succinylarginine dihydrolase | FCU54_01330 | Not Available | Negative | 286284 - 287627 | 49268.3 |
| succinylglutamate-semialdehyde dehydrogenase | FCU54_01335 | Not Available | Negative | 287624 - 289102 | 53022.4 |
| arginine n-succinyltransferase | FCU54_01340 | Not Available | Negative | 289099 - 290133 | 38458.0 |
| succinylornithine/acetylornithine transaminase | FCU54_01345 | Not Available | Negative | 290130 - 291350 | 43534.7 |
| exodeoxyribonuclease iii | FCU54_01350 | Not Available | Positive | 291796 - 292602 | 30938.8 |
| tvp38/tmem64 family protein | FCU54_01355 | Not Available | Positive | 292769 - 293479 | 26098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





