Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU54_25510 | Not Available | Negative | 5176398 - 5176622 | 8994.35 |
| copg family transcriptional regulator | FCU54_25515 | Not Available | Negative | 5176714 - 5176878 | 6209.41 |
| dna partition complex parg | FCU54_25520 | Not Available | Negative | 5177041 - 5177271 | 8634.28 |
| para family protein | FCU54_25525 | Not Available | Negative | 5177323 - 5177943 | 22039.6 |
| resolvase | FCU54_25530 | Not Available | Positive | 5178236 - 5178880 | 24619.5 |
| damage inducible protein | FCU54_25535 | Not Available | Negative | 5179035 - 5179118 | 3014.05 |
| malate dehydrogenase | FCU54_25545 | Not Available | Positive | 5180089 - 5180880 | 30359.7 |
| tn3-like element tnas1 family transposase | FCU54_25550 | Not Available | Negative | 5181021 - 5182534 | 56656.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | FCU54_25560 | Not Available | Negative | 5183828 - 5184307 | 16921.8 |
| xanthine dehydrogenase fad-binding subunit xdhb | FCU54_25565 | Not Available | Negative | 5184304 - 5185182 | 31491.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





