Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 abc transporter permease btuc | FCU54_01155 | Not Available | Negative | 253894 - 254874 | 34951.5 |
| integration host factor subunit alpha | FCU54_01160 | Not Available | Negative | 254975 - 255274 | 11354.6 |
| phenylalanine--trna ligase subunit beta | FCU54_01165 | Not Available | Negative | 255279 - 257666 | 87358.2 |
| phenylalanine--trna ligase subunit alpha | FCU54_01170 | Not Available | Negative | 257681 - 258664 | 36803.9 |
| phenylalanyl--trna ligase operon leader peptide | FCU54_01175 | Not Available | Negative | 258803 - 258847 | 1762.13 |
| 50s ribosomal protein l20 | FCU54_01180 | Not Available | Negative | 258970 - 259326 | 13497.7 |
| 50s ribosomal protein l35 | FCU54_01185 | Not Available | Negative | 259380 - 259577 | 7289.38 |
| translation initiation factor if-3 | FCU54_01190 | Not Available | Negative | 259674 - 260216 | 20565.2 |
| threonine--trna ligase | FCU54_01195 | Not Available | Negative | 260220 - 262148 | 74018.4 |
| shet2/espl2 family type iii secretion system effector toxin | FCU54_01200 | Not Available | Positive | 262671 - 264569 | 70826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





