Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma d regulator | FCU54_23930 | Not Available | Negative | 4894990 - 4895466 | 18243.9 |
| nad(+) diphosphatase | FCU54_23935 | Not Available | Positive | 4895561 - 4896334 | 29635.5 |
| uroporphyrinogen decarboxylase | FCU54_23940 | Not Available | Positive | 4896374 - 4897438 | 39250.4 |
| deoxyribonuclease v | FCU54_23945 | Not Available | Positive | 4897448 - 4898119 | 24673.9 |
| duf416 family protein | FCU54_23950 | Not Available | Positive | 4898162 - 4898752 | 22581.8 |
| dna-binding protein hu-alpha | FCU54_23955 | Not Available | Positive | 4898939 - 4899211 | 9535.51 |
| duf1481 domain-containing protein | FCU54_23960 | Not Available | Positive | 4899224 - 4899919 | 26380.9 |
| zinc resistance sensor/chaperone zrap | FCU54_23965 | Not Available | Negative | 4899921 - 4900346 | 15288.4 |
| two-component system sensor histidine kinase zras | FCU54_23970 | Not Available | Positive | 4900581 - 4901957 | 50506.1 |
| sigma-54-dependent response regulator transcription factor zrar | FCU54_23975 | Not Available | Positive | 4901954 - 4903279 | 48470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





