Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | FCU54_23880 | Not Available | Positive | 4883029 - 4884246 | 43806.2 |
| permease | FCU54_23885 | Not Available | Positive | 4884248 - 4885747 | 52971.2 |
| hypothetical protein | FCU54_23890 | Not Available | Positive | 4885740 - 4888394 | 99866.3 |
| duf4867 family protein | FCU54_23895 | Not Available | Negative | 4888425 - 4889075 | 24223.9 |
| 2-iminoacetate synthase thih | FCU54_23900 | Not Available | Negative | 4889393 - 4890526 | 43234.4 |
| thiazole synthase | FCU54_23905 | Not Available | Negative | 4890523 - 4891293 | 26920.8 |
| sulfur carrier protein this | FCU54_23910 | Not Available | Negative | 4891295 - 4891495 | 7322.83 |
| thiazole biosynthesis adenylyltransferase thif | FCU54_23915 | Not Available | Negative | 4891479 - 4892234 | 27049.6 |
| thiamine phosphate synthase | FCU54_23920 | Not Available | Negative | 4892227 - 4892862 | 23113.8 |
| phosphomethylpyrimidine synthase thic | FCU54_23925 | Not Available | Negative | 4892862 - 4894757 | 70789.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





