Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU54_23725 | Not Available | Negative | 4845566 - 4845838 | 9703.94 |
| parb/repb/spo0j family plasmid partition protein | FCU54_23730 | Not Available | Negative | 4846266 - 4847237 | 35318.2 |
| plasmid-partitioning protein sopa | FCU54_23735 | Not Available | Negative | 4847237 - 4848403 | 43662.6 |
| replication initiation protein repe | FCU54_23740 | Not Available | Negative | 4848991 - 4849746 | 29360.2 |
| phage integrase family protein | FCU54_23745 | Not Available | Negative | 4850520 - 4851326 | 29602.2 |
| type ii toxin-antitoxin system toxin ccdb | FCU54_23750 | Not Available | Negative | 4851327 - 4851632 | 11707.2 |
| type ii toxin-antitoxin system antitoxin ccda | FCU54_23755 | Not Available | Negative | 4851634 - 4851852 | 8372.8 |
| sensor domain-containing diguanylate cyclase | FCU54_23760 | Not Available | Negative | 4852448 - 4853422 | 36518.4 |
| duf305 domain-containing protein | FCU54_23770 | Not Available | Negative | 4855355 - 4855705 | 13055.0 |
| silver-binding protein sile | FCU54_23775 | Not Available | Negative | 4855849 - 4856280 | 15299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





