Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2554 family protein | FCU54_23530 | Not Available | Negative | 4809448 - 4809678 | 8727.36 |
| plp-dependent aminotransferase family protein | FCU54_23540 | Not Available | Positive | 4809999 - 4811405 | 52832.9 |
| abc transporter substrate-binding protein | FCU54_23545 | Not Available | Positive | 4811650 - 4812795 | 42294.4 |
| abc transporter atp-binding protein | FCU54_23550 | Not Available | Positive | 4812813 - 4813826 | 37124.9 |
| abc transporter permease | FCU54_23555 | Not Available | Positive | 4813827 - 4814768 | 34367.1 |
| abc transporter permease | FCU54_23560 | Not Available | Positive | 4814758 - 4815552 | 28723.5 |
| aminobutyraldehyde dehydrogenase | FCU54_23565 | Not Available | Positive | 4815574 - 4816998 | 50830.9 |
| stress response membrane protein yncl | FCU54_23570 | Not Available | Negative | 4817095 - 4817190 | 3490.44 |
| ghot/ortt family toxin | FCU54_23575 | Not Available | Positive | 4817385 - 4817558 | 6646.44 |
| duf2526 domain-containing protein | FCU54_23580 | Not Available | Positive | 4817644 - 4817877 | 8800.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





