Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribbon-helix-helix protein, copg family | FCU54_22465 | Not Available | Positive | 4589486 - 4589728 | 9291.08 |
| type ii toxin-antitoxin system vapc family toxin | FCU54_22470 | Not Available | Positive | 4589728 - 4590102 | 13961.0 |
| formate dehydrogenase accessory protein fdhe | FCU54_22475 | Not Available | Negative | 4590139 - 4591068 | 34720.6 |
| formate dehydrogenase cytochrome b556 subunit | FCU54_22480 | Not Available | Negative | 4591065 - 4591700 | 24607.7 |
| formate dehydrogenase subunit beta | FCU54_22485 | Not Available | Negative | 4591697 - 4592599 | 33102.1 |
| formate dehydrogenase o subunit alpha, selenocysteine-containing | FCU54_22490 | Not Available | Negative | 4592612 - 4595662 | 112389.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | FCU54_22495 | Not Available | Positive | 4595856 - 4596692 | 30697.0 |
| molecular chaperone htpg | FCU54_22500 | Not Available | Positive | 4597002 - 4598837 | 68118.8 |
| hypothetical protein | FCU54_22505 | Not Available | Positive | 4598839 - 4601145 | 89936.1 |
| duf3829 domain-containing protein | FCU54_22510 | Not Available | Positive | 4601340 - 4602395 | 39262.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





