Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin hoka | FCU54_22365 | Not Available | Negative | 4567647 - 4567799 | 5926.54 |
| utra domain-containing protein | FCU54_22370 | Not Available | Positive | 4568176 - 4568886 | 26940.3 |
| tim barrel protein | FCU54_22375 | Not Available | Positive | 4568894 - 4569874 | 37001.0 |
| mfs transporter | FCU54_22380 | Not Available | Positive | 4569976 - 4571241 | 46382.0 |
| porin ompl | FCU54_22385 | Not Available | Negative | 4571333 - 4572025 | 27161.6 |
| mfs transporter | FCU54_22390 | Not Available | Negative | 4572092 - 4573495 | 51656.0 |
| mfs transporter | FCU54_22395 | Not Available | Negative | 4573538 - 4574923 | 50985.1 |
| sulfoquinovosidase | FCU54_22400 | Not Available | Negative | 4574969 - 4577005 | 77147.9 |
| aldose-1-epimerase | FCU54_22405 | Not Available | Negative | 4577203 - 4578102 | 33073.5 |
| sulfoquinovose isomerase | FCU54_22410 | Not Available | Negative | 4578222 - 4579463 | 47421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





