Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | FCU54_22155 | Not Available | Negative | 4518336 - 4518938 | 22605.6 |
| lysr family transcriptional regulator | FCU54_22160 | Not Available | Positive | 4519458 - 4520357 | 33275.5 |
| inner membrane protein yhjd | FCU54_22165 | Not Available | Positive | 4520406 - 4521419 | 37917.5 |
| mhs family mfs transporter | FCU54_22170 | Not Available | Positive | 4521830 - 4523152 | 47210.9 |
| asma family protein | FCU54_22175 | Not Available | Negative | 4523331 - 4525391 | 74399.7 |
| cyclic-guanylate-specific phosphodiesterase | FCU54_22180 | Not Available | Negative | 4525461 - 4526228 | 29563.8 |
| 2-dehydro-3-deoxygluconokinase | FCU54_22185 | Not Available | Positive | 4526460 - 4527389 | 33964.2 |
| insulinase family protein | FCU54_22190 | Not Available | Negative | 4527484 - 4528980 | 55500.4 |
| dicarboxylate/amino acid:cation symporter | FCU54_22195 | Not Available | Negative | 4529200 - 4530486 | 45439.2 |
| biofilm formation regulator hmsp | FCU54_22200 | Not Available | Negative | 4530669 - 4532657 | 74457.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





