Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU54_22095 | Not Available | Negative | 4508558 - 4508779 | 8577.28 |
| dna methylase | FCU54_22100 | Not Available | Negative | 4508780 - 4509463 | 25537.6 |
| duf1281 domain-containing protein | FCU54_22110 | Not Available | Negative | 4509848 - 4510750 | 33906.7 |
| hypothetical protein | FCU54_22115 | Not Available | Negative | 4510788 - 4511057 | 9544.68 |
| protein impc | FCU54_22120 | Not Available | Positive | 4511168 - 4511416 | 9502.3 |
| translesion error-prone dna polymerase v autoproteolytic subunit | FCU54_22125 | Not Available | Positive | 4511413 - 4511850 | 16220.1 |
| translesion error-prone dna polymerase v subunit umuc | FCU54_22130 | Not Available | Positive | 4511850 - 4512675 | 30764.2 |
| glutamate decarboxylase | FCU54_22140 | Not Available | Negative | 4513223 - 4514623 | 52686.0 |
| cytochrome c peroxidase | FCU54_22145 | Not Available | Negative | 4514834 - 4516231 | 51543.2 |
| alpha,alpha-trehalase tref | FCU54_22150 | Not Available | Positive | 4516636 - 4518285 | 63718.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





