Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2002 family protein | FCU54_21365 | Not Available | Negative | 4375488 - 4375832 | 13066.5 |
| duf883 domain-containing protein | FCU54_21370 | Not Available | Positive | 4375984 - 4376313 | 11847.9 |
| plp-dependent aminotransferase family protein | FCU54_21375 | Not Available | Negative | 4376370 - 4377704 | 49796.2 |
| carboxymuconolactone decarboxylase family protein | FCU54_21380 | Not Available | Positive | 4377792 - 4378223 | 16132.4 |
| hypothetical protein | FCU54_21385 | Not Available | Positive | 4378231 - 4378416 | 6890.38 |
| glutaredoxin-like protein nrdh | FCU54_21390 | Not Available | Positive | 4378432 - 4378677 | 9170.01 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | FCU54_21395 | Not Available | Positive | 4378674 - 4379084 | 15341.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | FCU54_21400 | Not Available | Positive | 4379057 - 4381201 | 80453.4 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | FCU54_21405 | Not Available | Positive | 4381211 - 4382170 | 36474.1 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | FCU54_21410 | Not Available | Positive | 4382526 - 4383728 | 44116.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





