Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent succinate-semialdehyde dehydrogenase | FCU54_21315 | Not Available | Positive | 4367114 - 4368562 | 51756.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | FCU54_21320 | Not Available | Positive | 4368576 - 4369856 | 45652.3 |
| gaba permease | FCU54_21325 | Not Available | Positive | 4370093 - 4371493 | 51083.1 |
| dna-binding transcriptional regulator csir | FCU54_21330 | Not Available | Positive | 4371514 - 4372176 | 24992.3 |
| potassium binding protein kbp | FCU54_21335 | Not Available | Negative | 4372177 - 4372626 | 16094.0 |
| yqae/pmp3 family membrane protein | FCU54_21340 | Not Available | Negative | 4372710 - 4372868 | 5865.57 |
| helix-turn-helix transcriptional regulator | FCU54_21345 | Not Available | Positive | 4373051 - 4373350 | 10625.0 |
| thiosulfate sulfurtransferase ygap | FCU54_21350 | Not Available | Positive | 4373360 - 4373884 | 18749.0 |
| dna-binding protein stpa | FCU54_21355 | Not Available | Negative | 4373931 - 4374335 | 15375.4 |
| l-alanine exporter alae | FCU54_21360 | Not Available | Positive | 4375002 - 4375451 | 16968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





