Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | FCU54_21090 | Not Available | Positive | 4324378 - 4325529 | 41438.5 |
| bmc domain-containing protein | FCU54_21095 | Not Available | Positive | 4325574 - 4326119 | 18659.3 |
| tetr/acrr family transcriptional regulator | FCU54_21105 | Not Available | Negative | 4326792 - 4327457 | 25860.7 |
| hypothetical protein | FCU54_21120 | Not Available | Negative | 4329159 - 4329404 | 8670.13 |
| alpa family transcriptional regulator | FCU54_21125 | Not Available | Negative | 4329376 - 4329609 | 8998.71 |
| hypothetical protein | FCU54_21130 | Not Available | Negative | 4329678 - 4330253 | 21986.2 |
| inovirus gp2 family protein | FCU54_21135 | Not Available | Negative | 4330511 - 4331077 | 22495.7 |
| hypothetical protein | FCU54_21140 | Not Available | Negative | 4332566 - 4333306 | 28271.7 |
| is4-like element is4 family transposase | FCU54_21150 | Not Available | Positive | 4333853 - 4334796 | 35714.7 |
| ribosome-associated translation inhibitor raia | FCU54_21155 | Not Available | Positive | 4335057 - 4335398 | 12785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





