Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response protein ynhf | FCU54_00860 | Not Available | Negative | 193056 - 193145 | 2997.87 |
| hth-type transcriptional repressor purr | FCU54_00865 | Not Available | Positive | 193444 - 194469 | 38167.0 |
| lysr family transcriptional regulator | FCU54_00870 | Not Available | Negative | 194466 - 195398 | 35251.9 |
| bcr/cfla family multidrug efflux mfs transporter | FCU54_00875 | Not Available | Positive | 195511 - 196722 | 43399.9 |
| cyclopropane fatty acyl phospholipid synthase | FCU54_00880 | Not Available | Positive | 197013 - 198161 | 43911.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 198761 - 199137 | Not Available |
| riboflavin synthase | FCU54_00885 | Not Available | Negative | 198201 - 198842 | 23446.3 |
| multidrug efflux mate transporter mdtk | FCU54_00890 | Not Available | Positive | 199057 - 200430 | 49478.3 |
| hypothetical protein | FCU54_00895 | Not Available | Negative | 200471 - 201727 | 42835.6 |
| Trna-val | Not Available | Not Available | Positive | 202035 - 202111 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





