Escherichia coli strain SIEC015 16_NODE_101

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SIEC015 16_NODE_101 is a Gram-negative, rod-shaped bacterium that is facultative anaerobic and exhibits mobility due to the presence of flagella. It typically arranges itself in pairs or as single cells and thrives optimally at 37°C, classifying it as mesophilic. This strain is characterized by having a single replicon and two membranes. SIEC015 is primarily associated with various hosts, including Homo sapiens, Gallus gallus, and Bos taurus, among others. It interacts with a diverse range of organisms, spanning multiple taxa such as mammals, birds, amphibians, and plants, highlighting its ecological versatility. This strain is notable for its pathogenic potential in humans, being linked to several health complications. It is associated with urinary tract infections (UTIs), gastrointestinal infections, and various severe conditions such as neonatal meningitis, septicemia, and hemolytic uremic syndrome (HUS). The bacterium can cause both diarrheal diseases and colibacillosis, leading to significant health concerns, particularly in vulnerable populations. The diverse array of hosts and the multitude of diseases associated with E. coli strain SIEC015 underscore its ecological and biological significance. Its ability to thrive in various environments and its pathogenicity reinforce the importance of monitoring this strain in both clinical and environmental contexts to mitigate health risks associated with its infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain SIEC015 16_NODE_101

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SIEC015 16_NODE_101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain SIEC015 16_NODE_101


Gene Summary

Adenine Count

1325611 bp

Thymine Count

1319950 bp

Guanine Count

1317451 bp

Cytosine Count

1366835 bp

Genome Length

5329847 bp

Protein-coding Genes

4868 genes

Non-Coding Genes

285 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
stress response protein ynhfFCU54_00860Not AvailableNegative193056 - 1931452997.87
hth-type transcriptional repressor purrFCU54_00865Not AvailablePositive193444 - 19446938167.0
lysr family transcriptional regulatorFCU54_00870Not AvailableNegative194466 - 19539835251.9
bcr/cfla family multidrug efflux mfs transporterFCU54_00875Not AvailablePositive195511 - 19672243399.9
cyclopropane fatty acyl phospholipid synthaseFCU54_00880Not AvailablePositive197013 - 19816143911.3
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive198761 - 199137Not Available
riboflavin synthaseFCU54_00885Not AvailableNegative198201 - 19884223446.3
multidrug efflux mate transporter mdtkFCU54_00890Not AvailablePositive199057 - 20043049478.3
hypothetical proteinFCU54_00895Not AvailableNegative200471 - 20172742835.6
Trna-valNot AvailableNot AvailablePositive202035 - 202111Not Available

Displaying genes 401 – 410 of 5153 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total