Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | FCU54_20560 | Not Available | Negative | 4215155 - 4215661 | 19816.2 |
| fimbrial protein | FCU54_20565 | Not Available | Positive | 4216404 - 4216931 | 17697.7 |
| outer membrane usher protein pefc | FCU54_20570 | Not Available | Positive | 4217003 - 4219360 | 87312.7 |
| fimbrial chaperone | FCU54_20575 | Not Available | Positive | 4219368 - 4220048 | 25429.4 |
| fimbrial protein | FCU54_20580 | Not Available | Positive | 4220078 - 4221049 | 34972.6 |
| fimbrial protein | FCU54_20585 | Not Available | Positive | 4221063 - 4221584 | 18546.4 |
| fimbrial protein | FCU54_20590 | Not Available | Positive | 4221577 - 4222095 | 17880.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | FCU54_20595 | Not Available | Positive | 4222267 - 4226076 | 136609.0 |
| glutathione s-transferase | FCU54_20600 | Not Available | Positive | 4226233 - 4226841 | 22546.3 |
| l-seryl-trna(sec) selenium transferase | FCU54_20605 | Not Available | Positive | 4226939 - 4228330 | 50741.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





