Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | FCU54_20460 | Not Available | Negative | 4190075 - 4190839 | 28213.8 |
| hypothetical protein | FCU54_20465 | Not Available | Negative | 4190994 - 4191416 | 17042.3 |
| hypothetical protein | FCU54_20470 | Not Available | Negative | 4191423 - 4192271 | 33010.2 |
| arabinose operon transcriptional regulator arac | FCU54_20475 | Not Available | Negative | 4192785 - 4193630 | 32202.3 |
| ribulokinase | FCU54_20480 | Not Available | Positive | 4193969 - 4195669 | 61215.8 |
| l-arabinose isomerase | FCU54_20485 | Not Available | Positive | 4195680 - 4197182 | 56078.1 |
| l-ribulose-5-phosphate 4-epimerase | FCU54_20490 | Not Available | Positive | 4197351 - 4198046 | 25513.4 |
| dna polymerase ii | FCU54_20495 | Not Available | Positive | 4198121 - 4200472 | 90070.6 |
| rna polymerase-associated protein rapa | FCU54_20500 | Not Available | Positive | 4200636 - 4203542 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | FCU54_20505 | Not Available | Positive | 4203554 - 4204213 | 24862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





