Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | FCU54_20410 | Not Available | Positive | 4178917 - 4180488 | 57259.1 |
| 3-isopropylmalate dehydrogenase | FCU54_20415 | Not Available | Positive | 4180488 - 4181579 | 39530.3 |
| 3-isopropylmalate dehydratase large subunit | FCU54_20420 | Not Available | Positive | 4181582 - 4182982 | 49884.7 |
| 3-isopropylmalate dehydratase small subunit | FCU54_20425 | Not Available | Positive | 4182993 - 4183598 | 22630.8 |
| glucose uptake inhibitor sgrt | FCU54_20430 | Not Available | Negative | 4183706 - 4183837 | 5382.47 |
| hth-type transcriptional regulator sgrr | FCU54_20435 | Not Available | Positive | 4183926 - 4185584 | 64200.0 |
| type iii effector | FCU54_20440 | Not Available | Negative | 4185814 - 4186383 | 21745.7 |
| thiamine abc transporter substrate binding subunit | FCU54_20445 | Not Available | Positive | 4186754 - 4187737 | 36240.2 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | FCU54_20450 | Not Available | Positive | 4187713 - 4189323 | 59445.6 |
| thiamine abc transporter atp-binding protein thiq | FCU54_20455 | Not Available | Positive | 4189307 - 4190005 | 24922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





