Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | FCU54_19645 | Not Available | Positive | 4025689 - 4026816 | 43016.1 |
| bifunctional metallophosphatase/5'-nucleotidase | FCU54_19650 | Not Available | Positive | 4027049 - 4028599 | 56497.7 |
| bifunctional metallophosphatase/5'-nucleotidase | FCU54_19655 | Not Available | Positive | 4028640 - 4030259 | 59223.6 |
| nucleoside-specific channel-forming protein tsx | FCU54_19660 | Not Available | Positive | 4030338 - 4031198 | 32770.4 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | FCU54_19665 | Not Available | Negative | 4031415 - 4033847 | 88955.8 |
| cystathionine gamma-synthase | FCU54_19670 | Not Available | Negative | 4033850 - 4035010 | 41510.7 |
| met regulon transcriptional regulator metj | FCU54_19675 | Not Available | Positive | 4035287 - 4035604 | 12141.4 |
| yiix family permuted papain-like enzyme | FCU54_19680 | Not Available | Positive | 4035664 - 4036272 | 23156.0 |
| 50s ribosomal protein l31 | FCU54_19685 | Not Available | Negative | 4036333 - 4036545 | 7871.49 |
| primosomal protein n' | FCU54_19690 | Not Available | Positive | 4036748 - 4038946 | 81694.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





