Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | FCU54_19490 | Not Available | Positive | 3986424 - 3986807 | 14549.9 |
| glutamate racemase | FCU54_19495 | Not Available | Negative | 3987111 - 3987968 | 31133.8 |
| tonb-dependent vitamin b12 receptor btub | FCU54_19500 | Not Available | Negative | 3987913 - 3989757 | 68436.7 |
| trna (uridine(54)-c5)-methyltransferase trma | FCU54_19505 | Not Available | Positive | 3990126 - 3991226 | 41939.3 |
| yijd family membrane protein | FCU54_19510 | Not Available | Negative | 3991266 - 3991625 | 13024.3 |
| hth-type transcriptional repressor fabr | FCU54_19515 | Not Available | Negative | 3991625 - 3992275 | 24536.5 |
| si-specific nad(p)(+) transhydrogenase | FCU54_19520 | Not Available | Positive | 3992607 - 3994007 | 51576.4 |
| dna-binding transcriptional regulator oxyr | FCU54_19525 | Not Available | Negative | 3993990 - 3994907 | 34278.0 |
| mfs transporter | FCU54_19535 | Not Available | Negative | 3995159 - 3996442 | 46315.1 |
| d-galactonate dehydratase family protein | FCU54_19540 | Not Available | Negative | 3996509 - 3997723 | 45740.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





