Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-type zinc finger protein ybii | FCU54_19010 | Not Available | Negative | 3892145 - 3892411 | 9785.37 |
| pkhd-type hydroxylase ybix | FCU54_19015 | Not Available | Negative | 3892485 - 3893162 | 25512.2 |
| catecholate siderophore receptor fiu | FCU54_19020 | Not Available | Negative | 3893204 - 3895486 | 81902.4 |
| duf1471 domain-containing protein | FCU54_19025 | Not Available | Negative | 3895751 - 3896011 | 8908.71 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | FCU54_19030 | Not Available | Positive | 3896197 - 3897213 | 37710.1 |
| mechanosensitive channel protein | FCU54_19035 | Not Available | Negative | 3897210 - 3899435 | 81958.5 |
| glutamine abc transporter atp-binding protein glnq | FCU54_19040 | Not Available | Negative | 3899551 - 3900273 | 26733.6 |
| glutamine abc transporter permease | FCU54_19045 | Not Available | Negative | 3900270 - 3900929 | 24365.8 |
| glutamine abc transporter substrate-binding protein glnh | FCU54_19050 | Not Available | Negative | 3901068 - 3901814 | 27191.5 |
| dna starvation/stationary phase protection protein | FCU54_19055 | Not Available | Negative | 3902218 - 3902721 | 18696.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





