Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FCU54_18960 | Not Available | Negative | 3881074 - 3882810 | 63120.3 |
| secretion protein hlyd | FCU54_18965 | Not Available | Negative | 3882803 - 3883798 | 36273.7 |
| dna-binding transcriptional regulator cecr | FCU54_18970 | Not Available | Negative | 3883801 - 3884472 | 25034.1 |
| atp-dependent rna helicase rhle | FCU54_18975 | Not Available | Positive | 3884701 - 3886065 | 49996.4 |
| hypothetical protein | FCU54_18980 | Not Available | Positive | 3886222 - 3886662 | 16313.3 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | FCU54_18985 | Not Available | Positive | 3886662 - 3886943 | 10664.8 |
| atp-dependent dna helicase ding | FCU54_18990 | Not Available | Positive | 3887114 - 3889264 | 81444.9 |
| dna-binding protein ybib | FCU54_18995 | Not Available | Positive | 3889292 - 3890254 | 35108.7 |
| malate/lactate/ureidoglycolate dehydrogenase | FCU54_19000 | Not Available | Positive | 3890395 - 3891480 | 38885.3 |
| duf1471 domain-containing protein | FCU54_19005 | Not Available | Negative | 3891620 - 3891880 | 8568.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





