Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator mlra | FCU54_18660 | Not Available | Positive | 3821436 - 3822167 | 28056.8 |
| protein yoho | FCU54_18665 | Not Available | Positive | 3822227 - 3822334 | 3642.85 |
| glycine betaine abc transporter permease yehw | FCU54_18670 | Not Available | Negative | 3822315 - 3823046 | 25636.3 |
| glycine betaine abc transporter atp binding protein yehx | FCU54_18675 | Not Available | Negative | 3823051 - 3823977 | 34427.7 |
| glycine betaine abc transporter permease yehy | FCU54_18680 | Not Available | Negative | 3823970 - 3825127 | 41308.4 |
| glycine betaine abc transporter substrate-binding protein osmf | FCU54_18685 | Not Available | Negative | 3825134 - 3826051 | 32597.0 |
| beta-glucosidase bglx | FCU54_18690 | Not Available | Negative | 3826303 - 3828600 | 83561.8 |
| d-lactate dehydrogenase | FCU54_18695 | Not Available | Positive | 3828796 - 3830511 | 64696.0 |
| d-alanyl-d-alanine endopeptidase | FCU54_18700 | Not Available | Negative | 3830550 - 3831482 | 33889.4 |
| yip1 family protein | FCU54_18705 | Not Available | Negative | 3831656 - 3832243 | 21692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





