Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | FCU54_17960 | Not Available | Positive | 3660480 - 3661187 | 26393.8 |
| proline--trna ligase | FCU54_17965 | Not Available | Positive | 3661298 - 3663016 | 63606.2 |
| yaef family permuted papain-like enzyme | FCU54_17970 | Not Available | Positive | 3663069 - 3663893 | 30005.9 |
| envelope stress response activation lipoprotein nlpe | FCU54_17975 | Not Available | Negative | 3664049 - 3664759 | 25827.7 |
| aminoacyl-trna hydrolase | FCU54_17980 | Not Available | Negative | 3664773 - 3665195 | 15591.9 |
| yaeq family protein | FCU54_17985 | Not Available | Negative | 3665192 - 3665737 | 20818.7 |
| yaep family protein | FCU54_17990 | Not Available | Positive | 3665903 - 3666103 | 7214.59 |
| rho-binding antiterminator | FCU54_17995 | Not Available | Positive | 3666090 - 3666350 | 9640.41 |
| trna lysidine(34) synthetase tils | FCU54_18000 | Not Available | Negative | 3666384 - 3667697 | 48581.5 |
| voc family protein | FCU54_18005 | Not Available | Negative | 3667762 - 3668151 | 14707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





