Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease i | FCU54_17105 | Not Available | Positive | 3510934 - 3511641 | 26739.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | FCU54_17110 | Not Available | Positive | 3511721 - 3512452 | 26979.7 |
| glutathione synthase | FCU54_17115 | Not Available | Positive | 3512465 - 3513415 | 35615.0 |
| yqge/algh family protein | FCU54_17120 | Not Available | Positive | 3513524 - 3514087 | 20687.1 |
| holliday junction resolvase ruvx | FCU54_17125 | Not Available | Positive | 3514087 - 3514503 | 15187.2 |
| type iv pilus twitching motility protein pilt | FCU54_17130 | Not Available | Negative | 3514677 - 3515657 | 36045.5 |
| pyridoxal phosphate homeostasis protein | FCU54_17135 | Not Available | Positive | 3515675 - 3516379 | 25818.9 |
| osmotic shock tolerance protein yggt | FCU54_17140 | Not Available | Positive | 3516397 - 3516963 | 21168.5 |
| yggu family protein | FCU54_17145 | Not Available | Positive | 3516960 - 3517250 | 10429.8 |
| xtp/ditp diphosphatase | FCU54_17150 | Not Available | Positive | 3517258 - 3517851 | 20969.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





