Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prohibitin family protein | FCU54_17055 | Not Available | Positive | 3498331 - 3499239 | 33052.9 |
| transketolase | FCU54_17060 | Not Available | Negative | 3499459 - 3501450 | 72186.6 |
| metalloprotease | FCU54_17065 | Not Available | Positive | 3501728 - 3502486 | 27061.2 |
| agmatinase | FCU54_17070 | Not Available | Negative | 3502577 - 3503497 | 33572.9 |
| hypothetical protein | FCU54_17075 | Not Available | Negative | 3503633 - 3504364 | 26352.8 |
| biosynthetic arginine decarboxylase | FCU54_17080 | Not Available | Negative | 3504510 - 3506486 | 73890.6 |
| acid stress response protein yqgb | FCU54_17085 | Not Available | Negative | 3506495 - 3506626 | 4859.08 |
| methionine adenosyltransferase | FCU54_17090 | Not Available | Positive | 3507281 - 3508435 | 41954.0 |
| sugar porter family mfs transporter | FCU54_17095 | Not Available | Positive | 3508871 - 3510265 | 50985.6 |
| sprt family zinc-dependent metalloprotease | FCU54_17100 | Not Available | Positive | 3510342 - 3510839 | 19322.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





