Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf987 domain-containing protein | FCU54_16795 | Not Available | Negative | 3452306 - 3452527 | 8372.14 |
| purine permease | FCU54_16800 | Not Available | Positive | 3453021 - 3454469 | 51731.3 |
| hypothetical protein | FCU54_16805 | Not Available | Positive | 3454471 - 3454596 | 4757.28 |
| hypothetical protein | FCU54_16810 | Not Available | Negative | 3454593 - 3454664 | 2631.32 |
| isopentenyl-diphosphate delta-isomerase | FCU54_16815 | Not Available | Positive | 3454719 - 3455267 | 20514.5 |
| lysine--trna ligase | FCU54_16820 | Not Available | Negative | 3455310 - 3456827 | 57606.8 |
| peptide chain release factor 2 | FCU54_16825 | Not Available | Negative | 3456837 - 3457935 | 41222.9 |
| single-stranded-dna-specific exonuclease recj | FCU54_16830 | Not Available | Negative | 3458026 - 3459759 | 63348.6 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | FCU54_16835 | Not Available | Negative | 3459765 - 3460475 | 25637.1 |
| tyrosine recombinase xerd | FCU54_16840 | Not Available | Negative | 3460500 - 3461396 | 34248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





