Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | FCU54_16740 | Not Available | Negative | 3440478 - 3441995 | 57858.0 |
| dipeptide/tripeptide permease dtpc | FCU54_16745 | Not Available | Negative | 3442232 - 3443689 | 52909.6 |
| lysine decarboxylase cada | FCU54_16750 | Not Available | Negative | 3443748 - 3445895 | 81282.7 |
| cadaverine/lysine antiporter | FCU54_16755 | Not Available | Negative | 3445975 - 3447309 | 46667.8 |
| hypothetical protein | FCU54_16760 | Not Available | Positive | 3447539 - 3447784 | 9349.32 |
| cadc family transcriptional regulator | FCU54_16765 | Not Available | Negative | 3447675 - 3449213 | 57801.2 |
| duf4942 domain-containing protein | FCU54_16770 | Not Available | Negative | 3449962 - 3450804 | 32560.3 |
| duf957 domain-containing protein | FCU54_16775 | Not Available | Negative | 3450889 - 3451083 | 7317.65 |
| toxin | FCU54_16785 | Not Available | Negative | 3451308 - 3451685 | 14052.8 |
| type iv toxin-antitoxin system yeeu family antitoxin | FCU54_16790 | Not Available | Negative | 3451775 - 3452143 | 13626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





