Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | FCU54_16690 | Not Available | Positive | 3430831 - 3432186 | 50644.9 |
| duf2238 domain-containing protein | FCU54_16695 | Not Available | Negative | 3432183 - 3432833 | 24137.3 |
| fumarate hydratase | FCU54_16700 | Not Available | Negative | 3432956 - 3434602 | 60119.8 |
| anaerobic c4-dicarboxylate transporter | FCU54_16705 | Not Available | Negative | 3434680 - 3436020 | 47938.2 |
| two-component system response regulator dcur | FCU54_16710 | Not Available | Negative | 3436591 - 3437310 | 27489.9 |
| two-component system sensor histidine kinase dcus | FCU54_16715 | Not Available | Negative | 3437307 - 3438938 | 60521.3 |
| 4fe-4s mono-cluster protein yjdi | FCU54_16720 | Not Available | Positive | 3439119 - 3439349 | 8550.35 |
| n-acetyltransferase | FCU54_16725 | Not Available | Positive | 3439361 - 3439633 | 10469.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | FCU54_16730 | Not Available | Positive | 3439862 - 3440158 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | FCU54_16735 | Not Available | Positive | 3440186 - 3440359 | 6555.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





