Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia-forming nitrite reductase cytochrome c552 subunit | FCU54_16440 | Not Available | Positive | 3377891 - 3379327 | 53767.8 |
| cytochrome c nitrite reductase pentaheme subunit | FCU54_16445 | Not Available | Positive | 3379372 - 3379938 | 20656.6 |
| cytochrome c nitrite reductase fe-s protein | FCU54_16450 | Not Available | Positive | 3379935 - 3380606 | 24570.9 |
| cytochrome c nitrite reductase subunit nrfd | FCU54_16455 | Not Available | Positive | 3380603 - 3381559 | 35041.4 |
| heme lyase ccmf/nrfe family subunit | FCU54_16460 | Not Available | Positive | 3381639 - 3383297 | 61525.5 |
| heme lyase nrfefg subunit nrff | FCU54_16465 | Not Available | Positive | 3383290 - 3383673 | 14562.0 |
| heme lyase nrfefg subunit nrfg | FCU54_16470 | Not Available | Positive | 3383670 - 3384266 | 22773.5 |
| glutamate/aspartate:proton symporter gltp | FCU54_16475 | Not Available | Positive | 3384608 - 3385921 | 47134.0 |
| sel1 repeat family protein | FCU54_16480 | Not Available | Negative | 3386000 - 3386689 | 25080.4 |
| formate dehydrogenase subunit alpha | FCU54_16485 | Not Available | Negative | 3386783 - 3388930 | 79228.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





