Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein ssb1 | FCU54_16390 | Not Available | Positive | 3365794 - 3366330 | 18976.1 |
| hypothetical protein | FCU54_16395 | Not Available | Negative | 3366429 - 3366710 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | FCU54_16400 | Not Available | Positive | 3367140 - 3368726 | 60634.4 |
| superoxide response transcriptional regulator soxs | FCU54_16405 | Not Available | Negative | 3368729 - 3369052 | 12911.6 |
| redox-sensitive transcriptional activator soxr | FCU54_16410 | Not Available | Positive | 3369138 - 3369602 | 17235.8 |
| ncs2 family permease | FCU54_16415 | Not Available | Positive | 3370148 - 3371497 | 45762.5 |
| na+/h+ antiporter | FCU54_16420 | Not Available | Positive | 3371648 - 3373297 | 60526.6 |
| cation/acetate symporter actp | FCU54_16425 | Not Available | Negative | 3373379 - 3375028 | 59209.7 |
| duf485 domain-containing protein | FCU54_16430 | Not Available | Negative | 3375025 - 3375339 | 11672.3 |
| acetate--coa ligase | FCU54_16435 | Not Available | Negative | 3375540 - 3377498 | 72058.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





