Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase ii | FCU54_15400 | Not Available | Negative | 3185146 - 3187308 | 82008.7 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | FCU54_15405 | Not Available | Negative | 3187392 - 3188108 | 27095.3 |
| tyrosine recombinase xerc | FCU54_15410 | Not Available | Negative | 3188108 - 3189004 | 33869.7 |
| duf484 domain-containing protein | FCU54_15415 | Not Available | Negative | 3189001 - 3189708 | 26730.4 |
| diaminopimelate epimerase | FCU54_15420 | Not Available | Negative | 3189705 - 3190529 | 30210.4 |
| hypothetical protein | FCU54_15425 | Not Available | Negative | 3190566 - 3190769 | 7177.59 |
| duf3304 domain-containing protein | FCU54_15430 | Not Available | Positive | 3191112 - 3191666 | 20767.1 |
| hypothetical protein | FCU54_15440 | Not Available | Positive | 3192008 - 3194065 | 78553.2 |
| iron donor protein cyay | FCU54_15445 | Not Available | Positive | 3194113 - 3194433 | 12250.1 |
| class i adenylate cyclase | FCU54_15450 | Not Available | Negative | 3194473 - 3197019 | 97721.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





