Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' ssdna/rna exonuclease tatd | FCU54_15200 | Not Available | Negative | 3145367 - 3146149 | 29070.7 |
| sec-independent protein translocase subunit tatc | FCU54_15205 | Not Available | Negative | 3146191 - 3146967 | 28877.9 |
| sec-independent protein translocase subunit tatb | FCU54_15210 | Not Available | Negative | 3146970 - 3147485 | 18421.8 |
| sec-independent protein translocase subunit tata | FCU54_15215 | Not Available | Negative | 3147489 - 3147758 | 9664.5 |
| ubiquinone biosynthesis regulatory protein kinase ubib | FCU54_15220 | Not Available | Negative | 3147837 - 3149477 | 63246.4 |
| ubiquinone biosynthesis protein ubij | FCU54_15225 | Not Available | Negative | 3149474 - 3150079 | 22123.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | FCU54_15230 | Not Available | Negative | 3150093 - 3150848 | 28074.8 |
| dna recombination protein rmuc | FCU54_15235 | Not Available | Negative | 3150943 - 3152370 | 54753.6 |
| iclr family transcriptional regulator | FCU54_15240 | Not Available | Positive | 3152587 - 3153354 | 28298.0 |
| 2-dehydro-3-deoxygalactonokinase | FCU54_15245 | Not Available | Positive | 3153378 - 3154382 | 36407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





