Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein deglycase hcha | FCU54_14640 | Not Available | Negative | 3046212 - 3047063 | 31190.1 |
| porin | FCU54_14650 | Not Available | Negative | 3047655 - 3048728 | 39729.6 |
| hypothetical protein | FCU54_14655 | Not Available | Negative | 3049016 - 3049201 | 7314.23 |
| permease | FCU54_14660 | Not Available | Positive | 3049294 - 3049659 | 13838.9 |
| phosphohydrolase | FCU54_14665 | Not Available | Positive | 3049699 - 3050394 | 25877.7 |
| dna cytosine methyltransferase | FCU54_14670 | Not Available | Positive | 3050461 - 3051879 | 53522.9 |
| very short patch repair endonuclease | FCU54_14675 | Not Available | Positive | 3051860 - 3052330 | 17958.6 |
| drug/metabolite exporter yeda | FCU54_14680 | Not Available | Negative | 3052319 - 3053251 | 32614.5 |
| duf808 domain-containing protein | FCU54_14685 | Not Available | Positive | 3053424 - 3054341 | 32134.7 |
| duf2158 domain-containing protein | FCU54_14690 | Not Available | Positive | 3054420 - 3054602 | 6678.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





