Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | FCU54_14590 | Not Available | Positive | 3035997 - 3036554 | 18682.6 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | FCU54_14595 | Not Available | Positive | 3036607 - 3038070 | 51299.6 |
| voc family protein | FCU54_14600 | Not Available | Negative | 3038213 - 3038602 | 14541.5 |
| duf4102 domain-containing protein | FCU54_14605 | Not Available | Negative | 3038804 - 3040024 | 45842.7 |
| metal-binding protein zint | FCU54_14610 | Not Available | Negative | 3040872 - 3041522 | 24785.1 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | FCU54_14615 | Not Available | Negative | 3041780 - 3042415 | 24012.6 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | FCU54_14620 | Not Available | Negative | 3042416 - 3043420 | 37372.9 |
| hydroxyisourate hydrolase | FCU54_14625 | Not Available | Negative | 3043529 - 3043942 | 15537.6 |
| response regulator transcription factor hprr | FCU54_14630 | Not Available | Positive | 3044075 - 3044746 | 24996.2 |
| heavy metal sensor histidine kinase | FCU54_14635 | Not Available | Positive | 3044746 - 3046104 | 50739.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





