Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exoribonuclease ii | FCU54_14330 | Not Available | Positive | 2993176 - 2995110 | 72466.7 |
| hypothetical protein | FCU54_14335 | Not Available | Negative | 2995188 - 2995292 | 4122.21 |
| cyclic di-gmp phosphodiesterase | FCU54_14340 | Not Available | Positive | 2995346 - 2997331 | 74779.4 |
| hypothetical protein | FCU54_14345 | Not Available | Positive | 2997479 - 2997652 | 6441.71 |
| deor/glpr transcriptional regulator | FCU54_14350 | Not Available | Positive | 2997742 - 2998491 | 27590.2 |
| osmotically-inducible lipoprotein osmb | FCU54_14355 | Not Available | Positive | 2998760 - 2998978 | 6962.54 |
| stress response translation initiation inhibitor ycih | FCU54_14360 | Not Available | Negative | 2999104 - 2999430 | 11411.0 |
| orotidine-5'-phosphate decarboxylase | FCU54_14365 | Not Available | Negative | 2999430 - 3000167 | 26231.6 |
| lipopolysaccharide assembly protein lapb | FCU54_14370 | Not Available | Negative | 3000359 - 3001528 | 44533.6 |
| lipopolysaccharide assembly protein lapa | FCU54_14375 | Not Available | Negative | 3001535 - 3001843 | 11324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





