Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate transaminase | FCU54_14225 | Not Available | Negative | 2968180 - 2969445 | 44733.7 |
| fad-binding oxidoreductase | FCU54_14230 | Not Available | Negative | 2969483 - 2970763 | 47116.1 |
| aldehyde dehydrogenase puuc | FCU54_14235 | Not Available | Negative | 2970765 - 2972252 | 53425.5 |
| hth-type transcriptional regulator puur | FCU54_14240 | Not Available | Negative | 2972402 - 2972959 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | FCU54_14245 | Not Available | Negative | 2972986 - 2973750 | 28014.7 |
| glutamine synthetase | FCU54_14250 | Not Available | Positive | 2973962 - 2975380 | 53180.2 |
| hypothetical protein | FCU54_14255 | Not Available | Positive | 2975529 - 2975693 | 5971.24 |
| putrescine/proton symporter puup | FCU54_14260 | Not Available | Positive | 2975683 - 2977068 | 50842.9 |
| duf2543 family protein | FCU54_14265 | Not Available | Positive | 2977202 - 2977447 | 9283.79 |
| peptide abc transporter substrate-binding protein sapa | FCU54_14270 | Not Available | Positive | 2977760 - 2979403 | 61469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





