Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase t | FCU54_13375 | Not Available | Negative | 2792362 - 2793588 | 44912.0 |
| spermidine/putrescine abc transporter atp-binding protein pota | FCU54_13380 | Not Available | Positive | 2793838 - 2794974 | 43030.8 |
| spermidine/putrescine abc transporter permease potb | FCU54_13385 | Not Available | Positive | 2794958 - 2795815 | 32240.3 |
| spermidine/putrescine abc transporter permease potc | FCU54_13390 | Not Available | Positive | 2795812 - 2796606 | 29112.7 |
| spermidine/putrescine abc transporter substrate-binding protein potd | FCU54_13395 | Not Available | Positive | 2796603 - 2797649 | 38855.0 |
| duf3592 domain-containing protein | FCU54_13400 | Not Available | Positive | 2797707 - 2798168 | 17478.0 |
| tpm domain-containing protein | FCU54_13405 | Not Available | Positive | 2798165 - 2798953 | 28880.6 |
| nad-dependent protein deacylase | FCU54_13410 | Not Available | Negative | 2799091 - 2799912 | 30938.2 |
| n-acetylglucosamine kinase | FCU54_13415 | Not Available | Negative | 2799928 - 2800839 | 33120.7 |
| lipoprotein-releasing abc transporter permease subunit lole | FCU54_13420 | Not Available | Negative | 2800868 - 2802112 | 45338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





