Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-adapter protein iram | FCU54_13325 | Not Available | Positive | 2782633 - 2782956 | 12188.2 |
| nadp-dependent isocitrate dehydrogenase | FCU54_13330 | Not Available | Negative | 2783059 - 2784309 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | FCU54_13335 | Not Available | Positive | 2784481 - 2785134 | 24867.8 |
| phosphatase nudj | FCU54_13340 | Not Available | Positive | 2785144 - 2785605 | 17418.8 |
| trna 2-thiouridine(34) synthase mnma | FCU54_13345 | Not Available | Positive | 2785659 - 2786765 | 40961.7 |
| high frequency lysogenization protein hfld | FCU54_13350 | Not Available | Positive | 2786801 - 2787442 | 22949.0 |
| adenylosuccinate lyase | FCU54_13355 | Not Available | Positive | 2787446 - 2788816 | 51545.7 |
| two-component system response regulator phop | FCU54_13360 | Not Available | Positive | 2788985 - 2789656 | 25536.7 |
| two-component system sensor histidine kinase phoq | FCU54_13365 | Not Available | Positive | 2789656 - 2791116 | 55320.9 |
| cupin domain-containing protein | FCU54_13370 | Not Available | Positive | 2791192 - 2792313 | 42567.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





