Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose:h+ symporter permease | FCU54_13175 | Not Available | Positive | 2757894 - 2759210 | 47597.7 |
| l-fucose isomerase | FCU54_13180 | Not Available | Positive | 2759243 - 2761018 | 64980.3 |
| l-fuculokinase | FCU54_13185 | Not Available | Positive | 2761127 - 2762545 | 52205.6 |
| l-fucose mutarotase | FCU54_13190 | Not Available | Positive | 2762547 - 2762969 | 15474.0 |
| l-fucose operon activator | FCU54_13195 | Not Available | Positive | 2763027 - 2763758 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | FCU54_13200 | Not Available | Negative | 2763802 - 2764902 | 41920.5 |
| duf423 domain-containing protein | FCU54_13205 | Not Available | Negative | 2764895 - 2765290 | 14334.0 |
| transcriptional regulator gcva | FCU54_13210 | Not Available | Negative | 2765309 - 2766226 | 34403.4 |
| ygdi/ygdr family lipoprotein | FCU54_13215 | Not Available | Negative | 2766577 - 2766804 | 8174.67 |
| cysteine desulfurase csda | FCU54_13220 | Not Available | Positive | 2766996 - 2768201 | 43308.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





