Escherichia coli strain SIEC015 16_NODE_101

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SIEC015 16_NODE_101
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain SIEC015 16_NODE_101

Accession NumberSWME00000000.1

Gene Summary

Adenine Count

1325611 bp

Thymine Count

1319950 bp

Guanine Count

1317451 bp

Cytosine Count

1366835 bp

Genome Length

5329847 bp

Protein-coding Genes

4868 genes

Non-Coding Genes

285 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Ncrna_class:otherNot AvailableNot Available+24019 - 24202Not Available
atp-binding cassette domain-containing proteinFCU54_00105Not Available-24437 - 2536334769.3
abc transporter atp-binding proteinFCU54_00110Not Available-25356 - 2634236074.1
d,d-dipeptide abc transporter permeaseFCU54_00115Not Available-26339 - 2723531974.9
abc transporter permeaseFCU54_00120Not Available-27232 - 2825437384.4
abc transporter substrate-binding proteinFCU54_00125Not Available-28256 - 2980657698.4
d-alanyl-d-alanine dipeptidaseFCU54_00130Not Available-29820 - 3040121252.2
oxygen-sensing cyclic-di-gmp phosphodiesteraseFCU54_00135Not Available-30659 - 3305890198.5
diguanylate cyclase doscFCU54_00140Not Available-33083 - 3446553182.7
glycoside hydrolase family 10 proteinFCU54_00145Not Available-34841 - 3616049647.9

Displaying genes 251 – 260 of 5153 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites