Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | FCU54_12355 | Not Available | Positive | 2585509 - 2585868 | 13790.0 |
| membrane protein insertion efficiency factor yidd | FCU54_12360 | Not Available | Positive | 2585832 - 2586089 | 9381.61 |
| membrane protein insertase yidc | FCU54_12365 | Not Available | Positive | 2586092 - 2587738 | 61543.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | FCU54_12370 | Not Available | Positive | 2587844 - 2589208 | 49199.8 |
| tryptophanase leader peptide | FCU54_12375 | Not Available | Positive | 2589451 - 2589525 | 2894.56 |
| tryptophanase | FCU54_12380 | Not Available | Positive | 2589746 - 2591161 | 52776.4 |
| low affinity tryptophan permease tnab | FCU54_12385 | Not Available | Positive | 2591252 - 2592499 | 45227.3 |
| multidrug efflux mfs transporter mdtl | FCU54_12390 | Not Available | Positive | 2592632 - 2593807 | 41492.2 |
| hth-type transcriptional regulator yidz | FCU54_12395 | Not Available | Positive | 2593782 - 2594741 | 36946.0 |
| hypothetical protein | FCU54_12400 | Not Available | Positive | 2594898 - 2595647 | 27648.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





