Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | FCU54_00055 | Not Available | Positive | 14764 - 17811 | 112765.0 |
| formate dehydrogenase subunit beta | FCU54_00060 | Not Available | Positive | 17824 - 18708 | 32240.4 |
| formate dehydrogenase-n subunit gamma | FCU54_00065 | Not Available | Positive | 18701 - 19354 | 25388.0 |
| higa family addiction module antidote protein | FCU54_00070 | Not Available | Negative | 19405 - 19689 | 10401.7 |
| killer protein | FCU54_00075 | Not Available | Negative | 19689 - 19967 | 10521.7 |
| alcohol dehydrogenase adhp | FCU54_00080 | Not Available | Negative | 20153 - 21163 | 35371.6 |
| nad-dependent malic enzyme | FCU54_00085 | Not Available | Negative | 21297 - 22994 | 63167.0 |
| stationary-phase-induced ribosome-associated protein | FCU54_00090 | Not Available | Negative | 23151 - 23288 | 5096.13 |
| biofilm-dependent modulation protein | FCU54_00095 | Not Available | Negative | 23390 - 23605 | 7988.24 |
| peroxiredoxin osmc | FCU54_00100 | Not Available | Positive | 23950 - 24381 | 15089.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





