Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU54_12050 | Not Available | Positive | 2514088 - 2514576 | 17940.5 |
| duf957 domain-containing protein | FCU54_12055 | Not Available | Positive | 2514588 - 2514785 | 7426.74 |
| duf4942 domain-containing protein | FCU54_12060 | Not Available | Positive | 2514870 - 2515712 | 32522.1 |
| cytoplasmic protein | FCU54_12065 | Not Available | Positive | 2515977 - 2516126 | 5594.87 |
| sugar efflux transporter setb | FCU54_12070 | Not Available | Positive | 2516510 - 2517694 | 43480.0 |
| dmt family transporter | FCU54_12075 | Not Available | Positive | 2517805 - 2518728 | 33093.4 |
| lipoprotein nlpa | FCU54_12080 | Not Available | Negative | 2518732 - 2519550 | 29385.2 |
| hypothetical protein | FCU54_12085 | Not Available | Positive | 2519759 - 2520052 | 11049.3 |
| cesd/sycd/lcrh family type iii secretion system chaperone | FCU54_12090 | Not Available | Positive | 2520354 - 2520851 | 19156.8 |
| hypothetical protein | FCU54_12095 | Not Available | Positive | 2520861 - 2521043 | 6835.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





