Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (d)cmp kinase | FCU54_11845 | Not Available | Negative | 2465645 - 2466328 | 24747.8 |
| metalloprotease | FCU54_11850 | Not Available | Negative | 2466501 - 2467265 | 26738.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | FCU54_11855 | Not Available | Negative | 2467434 - 2468717 | 46069.6 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | FCU54_11860 | Not Available | Negative | 2468788 - 2469876 | 39881.6 |
| duf421 domain-containing protein | FCU54_11865 | Not Available | Negative | 2470075 - 2470767 | 26269.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | FCU54_11870 | Not Available | Positive | 2470897 - 2472657 | 65663.1 |
| formate transporter foca | FCU54_11875 | Not Available | Positive | 2473063 - 2473920 | 30992.6 |
| formate c-acetyltransferase | FCU54_11880 | Not Available | Positive | 2473975 - 2476257 | 85355.0 |
| pyruvate formate lyase 1-activating protein | FCU54_11885 | Not Available | Positive | 2476449 - 2477189 | 28205.9 |
| nad(p)h oxidoreductase | FCU54_11890 | Not Available | Negative | 2477271 - 2477861 | 22979.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





