Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope biogenesis factor elyc | FCU54_11795 | Not Available | Positive | 2454130 - 2454909 | 28668.0 |
| hypothetical protein | FCU54_11800 | Not Available | Negative | 2454886 - 2455779 | 34489.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | FCU54_11805 | Not Available | Negative | 2455933 - 2456679 | 27615.1 |
| protein ycar | FCU54_11810 | Not Available | Negative | 2456676 - 2456858 | 6855.35 |
| winged helix-turn-helix domain-containing protein | FCU54_11815 | Not Available | Negative | 2456910 - 2458142 | 47666.5 |
| tetraacyldisaccharide 4'-kinase | FCU54_11820 | Not Available | Negative | 2458179 - 2459165 | 35569.2 |
| lipid a abc transporter atp-binding protein/permease msba | FCU54_11825 | Not Available | Negative | 2459162 - 2460910 | 64464.6 |
| comec family protein | FCU54_11830 | Not Available | Negative | 2460947 - 2463211 | 84541.0 |
| integration host factor subunit beta | FCU54_11835 | Not Available | Negative | 2463417 - 2463701 | 10651.8 |
| 30s ribosomal protein s1 | FCU54_11840 | Not Available | Negative | 2463861 - 2465534 | 61161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





