Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane integrity-associated transporter subunit pqia | FCU54_11645 | Not Available | Negative | 2414613 - 2415866 | 46436.2 |
| abc transporter atp-binding protein | FCU54_11650 | Not Available | Negative | 2415996 - 2417903 | 72101.1 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | FCU54_11655 | Not Available | Negative | 2417915 - 2420023 | 78770.4 |
| 6-n-hydroxylaminopurine resistance protein ycbx | FCU54_11660 | Not Available | Positive | 2420121 - 2421230 | 40565.5 |
| cell division protein zapc | FCU54_11665 | Not Available | Negative | 2421227 - 2421769 | 20589.9 |
| quinone-dependent dihydroorotate dehydrogenase | FCU54_11670 | Not Available | Negative | 2421943 - 2422953 | 36791.7 |
| fimbrial chaperone | FCU54_11675 | Not Available | Negative | 2423064 - 2423774 | 25918.3 |
| type 1 fimbrial protein | FCU54_11680 | Not Available | Negative | 2423767 - 2424282 | 18355.8 |
| fimbrial protein | FCU54_11685 | Not Available | Negative | 2424290 - 2424832 | 18942.7 |
| fimbrial protein | FCU54_11690 | Not Available | Negative | 2424844 - 2425914 | 37947.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





